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dc.contributorDepartment of Applied Biology and Chemical Technologyen_US
dc.contributor.advisorZhao, Qian (ABCT)en_US
dc.creatorTse, Yin Suen-
dc.identifier.urihttps://theses.lib.polyu.edu.hk/handle/200/13532-
dc.languageEnglishen_US
dc.publisherHong Kong Polytechnic Universityen_US
dc.rightsAll rights reserveden_US
dc.titleInvestigation of hypoxia-induced novel alternative proteins in Hepatocellular Carcinoma with a multi-omics approachen_US
dcterms.abstractHepatocellular carcinoma (HCC) represents the predominant form of primary liver cancer, accounting for the majority of cancer-related deaths worldwide. Conventional treatments are only effective for patients with early-stage disease. The propensity for late-stage diagnosis, coupled with the restricted spectrum of available treatment interventions, significantly contributes to the high mortality rates associated with HCC.en_US
dcterms.abstractIt has recently been recognised that alternative proteins (AltProts), which originate from non-coding regions, represent a promising new avenue for therapeutic intervention. Despite their crucial role in cancer progression, the identification of AltProts remains challenging. Hypoxia, defined as a condition characterized by low oxygen levels, is a common feature of HCC and contributes to its progression. There has been a paucity of empirical research conducted to delineate the existence and function of AltProts under hypoxic conditions.en_US
dcterms.abstractIn order to address these research interests, two objectives were focused in this study: (i) to optimise the workflow of the discovery of novel AltProts; (ii) to elucidate the functional significance of these AltProts under hypoxic conditions in HCC. A multi-omics approach was employed by combining transcriptomics data to build an in-house database for mass spectrometry-based proteomics analysis. A set of hypoxia-induced AltProts were successfully identified, revealing a distinct expression pattern under hypoxic conditions.en_US
dcterms.abstractOne AltProt of particular interest, designated Hpx1, demonstrated upregulation under hypoxic conditions and was implicated in several critical cellular processes. The amino acid sequence of Hpx1 exhibited a high degree of conservation. Analysis of multiple public HCC clinical datasets revealed that Hpx1 expression was elevated in tumor tissues relative to normal hepatic samples. Functional assays conducted in vitro under hypoxic conditions indicated that Hpx1 promoted cell proliferation and migration, thereby suggesting a contributory role in the tumorigenic process of HCC.en_US
dcterms.abstractIn summary, this study provides novel insights into the role of hypoxia-induced AltProts in HCC and highlights their potential as therapeutic targets. The multi-omics approach presented herein represents a robust and innovative approach for the identification and characterization of novel AltProts in cancer biology, stimulating the development of innovative therapeutic strategies.en_US
dcterms.extent94 pages : color illustrations, mapen_US
dcterms.isPartOfPolyU Electronic Thesesen_US
dcterms.issued2024en_US
dcterms.educationalLevelM.Phil.en_US
dcterms.educationalLevelAll Masteren_US
dcterms.LCSHLiver -- Cancer -- Treatmenten_US
dcterms.LCSHProteomicsen_US
dcterms.LCSHAnoxemiaen_US
dcterms.LCSHHong Kong Polytechnic University -- Dissertationsen_US
dcterms.accessRightsopen accessen_US

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Please use this identifier to cite or link to this item: https://theses.lib.polyu.edu.hk/handle/200/13532